Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6187: 14555 - BLAST Cytoplasmic dynein 1 intermediate chain 1 [Wallem..., at 208221 to 211423 14555 mRNA_6188: 14556 - Hypothetical Protein, at 211596 to 212147 14556 mRNA_6189: 14557 - ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799, at 212357 to 214481 14557 mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215040 to 217246 14558 mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559
Group Condition mRNA_6187 mRNA_6188 mRNA_6189 mRNA_6190 mRNA_6191
14555
14556
14557
14558
14559
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 -0.6 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.2 -0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.1 -0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 -0.2 -0.4 0.0
growth on oleic acid YNB Oleic Acid -0.4 0.0 -0.1 -0.5 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.1 0.2 -0.3 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 0.2 -0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.1 0.1 -0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 -0.1 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 0.0 -0.2 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.2 0.1 -0.4 -0.5
growth on ypd YPD -0.4 -0.1 0.3 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.2 0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 0.0 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1 0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0 0.2 0.1 -0.1
auxotrophy YNB Glucose -0.2 -0.3 0.2 -0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 0.0 -0.2 0.3
auxotrophy Dropout Complete 0.0 0.1 0.0 -0.3 0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 0.3 -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3 0.5 0.0 -0.2
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