Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6179: 14547 - KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s), at 187281 to 188756 14547 mRNA_6180: 14548 - KOG0218 Mismatch repair MSH3, at 188869 to 192529 14548 mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192986 to 195356 14549 mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196153 to 199901 14550 mRNA_6183: 14551 - Hypothetical Protein, at 200560 to 201520 14551
Group Condition mRNA_6179 mRNA_6180 mRNA_6181 mRNA_6182 mRNA_6183
14547
14548
14549
14550
14551
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -1.7   -2.9 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -1.2   -0.5 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.8   -1.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 0.2   -0.8 0.0
auxotrophy YNB Glucose -0.3 -0.3   -0.6 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.7   -0.4 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.7   -0.5 0.1
growth on oleic acid YNB Glucose -0.3 -0.5   -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 0.1   -2.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2   -0.4 -0.2
growth on ypd YPD -1.1 -0.4   0.9 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -1.2   1.0 0.3
auxotrophy Dropout Complete 0.0 -0.3   -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1   -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1   -0.0 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.1   0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.0   0.1 0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 0.7   0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.1   0.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.2   0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.3   1.8 -0.0
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