Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6173: 14541 - K00698 CHS1 chitin synthase, at 172279 to 176176 14541 mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178357 to 180910 14543 mRNA_6176: 14544 - K03000 RPA12, ZNRD1 DNA-directed RNA polymerase I subunit RPA12, at 182326 to 182954 14544 mRNA_6177: 14545 - K00868 pdxK, pdxY pyridoxine kinase, at 183334 to 184793 14545
Group Condition mRNA_6173 mRNA_6174 mRNA_6175 mRNA_6176 mRNA_6177
14541
14542
14543
14544
14545
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -1.3 -0.9   0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 0.2   -0.0
growth on oleic acid YNB Glucose 0.0 -0.2 -0.1   -0.2
growth on ypd YPD 0.3 -0.3 0.1   -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 0.0   0.0
growth on oleic acid YNB Oleic Acid 0.0 -0.2 0.1   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 0.2   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.1 0.4   -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.4 -0.1   -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.0   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.1 -0.3   0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.1 0.1   0.3
growth on ricinoleic acid YNB Glucose -0.2 0.2 -0.2   0.5
auxotrophy Dropout Complete 0.2 0.0 -0.0   0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.3 -0.1   -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.0   0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.1   0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.4 0.2   -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.5   0.2
auxotrophy YNB Glucose 0.1 0.4 0.2   0.2
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