Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169850 to 171909 14540 mRNA_6173: 14541 - K00698 CHS1 chitin synthase, at 172279 to 176176 14541 mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178357 to 180910 14543 mRNA_6176: 14544 - K03000 RPA12, ZNRD1 DNA-directed RNA polymerase I subunit RPA12, at 182326 to 182954 14544
Group Condition mRNA_6172 mRNA_6173 mRNA_6174 mRNA_6175 mRNA_6176
14540
14541
14542
14543
14544
ypd buoyancy 40 hrs No Buoyancy Separation   0.3 -1.3 -0.9  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.0 -0.6 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 0.1 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 -0.3 -0.1  
growth on oleic acid YNB Glucose   0.0 -0.2 -0.1  
growth on ricinoleic acid YNB Glucose   -0.2 0.2 -0.2  
growth on oleic acid YNB Oleic Acid   0.0 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.2 0.0  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.3 0.1 0.1  
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.1 0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 -0.3 0.2  
growth on ypd YPD   0.3 -0.3 0.1  
auxotrophy Dropout Complete   0.2 0.0 -0.0  
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.1 -0.0  
auxotrophy YNB Glucose 75mM Arginine   0.2 0.1 0.1  
auxotrophy YNB Glucose 75mM Methionine   0.2 0.3 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate   0.2 0.4 -0.1  
ypd buoyancy 40 hrs High Buoyancy   0.1 0.0 0.5  
auxotrophy YNB Glucose   0.1 0.4 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 -0.1 0.4  
facs on lipid accumulation Sorted No BODIPY Gate   0.2 0.4 0.2  
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