Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6171: 14539 - SUPERFAMILY--SSF52047, at 166707 to 169416 14539 mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169850 to 171909 14540 mRNA_6173: 14541 - K00698 CHS1 chitin synthase, at 172279 to 176176 14541 mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178357 to 180910 14543
Group Condition mRNA_6171 mRNA_6172 mRNA_6173 mRNA_6174 mRNA_6175
14539
14540
14541
14542
14543
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   0.3 -1.3 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4   0.1 -0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.2 0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.0 -0.6 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.0 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.3 0.1 0.1
growth on oleic acid YNB Glucose 0.1   0.0 -0.2 -0.1
growth on oleic acid YNB Oleic Acid 0.0   0.0 -0.2 0.1
growth on ricinoleic acid YNB Glucose 0.2   -0.2 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1   0.1 -0.1 0.0
auxotrophy Dropout Complete -0.1   0.2 0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.2   0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.2 -0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.1 0.1 -0.0
auxotrophy YNB Glucose -0.3   0.1 0.4 0.2
ypd buoyancy 40 hrs High Buoyancy -0.2   0.1 0.0 0.5
growth on ypd YPD 0.4   0.3 -0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1   0.2 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.2 0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.2 0.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.4 -0.1 0.4
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