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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6171: 14539 - SUPERFAMILY--SSF52047, at 166707 to 169416
14539
mRNA_6172: 14540 - K02685 PRI2 DNA primase large subunit, at 169850 to 171909
14540
mRNA_6173: 14541 - K00698 CHS1 chitin synthase, at 172279 to 176176
14541
mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176764 to 178095
14542
mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178357 to 180910
14543
Group
Condition
mRNA_6171
mRNA_6172
mRNA_6173
mRNA_6174
mRNA_6175
14539
14540
14541
14542
14543
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.3
-1.3
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.1
-0.2
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.2
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.0
-0.6
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
0.1
0.1
growth on oleic acid
YNB Glucose
0.1
0.0
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.0
-0.2
0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.2
0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.1
0.0
auxotrophy
Dropout Complete
-0.1
0.2
0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
-0.3
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.1
-0.0
auxotrophy
YNB Glucose
-0.3
0.1
0.4
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.1
0.0
0.5
growth on ypd
YPD
0.4
0.3
-0.3
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.2
0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
0.4
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.4
-0.1
0.4
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