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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6164: 14532 - BLAST ECSIT domain-containing protein [Rhizoctonia solani A..., at 149620 to 151505
14532
mRNA_6165: 14533 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-F-box-like-PF12937,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF50978,SUPERFAMILY--SSF81383, at 151697 to 155852
14533
mRNA_6166: 14534 - Hypothetical Protein, at 156004 to 157222
14534
mRNA_6167: 14535 - K11672 ACTR5, ARP5, INO80M actin-related protein 5, at 157768 to 160667
14535
mRNA_6168: 14536 - SUPERFAMILY--SSF52047, at 160980 to 164129
14536
Group
Condition
mRNA_6164
mRNA_6165
mRNA_6166
mRNA_6167
mRNA_6168
14532
14533
14534
14535
14536
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.9
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
0.1
auxotrophy
YNB Glucose
0.0
0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
0.3
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.4
-0.2
growth on ypd
YPD
-0.0
0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.3
0.1
auxotrophy
Dropout Complete
0.2
0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.5
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
0.5
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.5
0.3
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