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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73930 to 78529
14498
mRNA_6131: 14499 - K01057 PGLS, pgl, devB 6-phosphogluconolactonase, at 79041 to 80063
14499
mRNA_6132: 14500 - K20630 CHN1_2, ARHGAP2_3 chimaerin, at 80380 to 84392
14500
mRNA_6133: 14501 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 85316 to 87118
14501
mRNA_6134: 14502 - KOG1477 SPRY domain-containing proteins, at 88060 to 89781
14502
Group
Condition
mRNA_6130
mRNA_6131
mRNA_6132
mRNA_6133
mRNA_6134
14498
14499
14500
14501
14502
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
-0.4
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.7
0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.5
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.8
0.3
0.1
auxotrophy
YNB Glucose
-0.4
0.2
0.0
growth on ypd
YPD
-0.0
-0.3
0.3
auxotrophy
Dropout Complete
-0.1
0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.4
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
-0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.2
-0.3
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.7
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.2
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
0.2
0.0
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