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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6118: 14486 - K03164 TOP2 DNA topoisomerase II, at 31417 to 38158
14486
mRNA_6119: 14487 - K15280 SLC35C2 solute carrier family 35, member C2, at 38335 to 41391
14487
mRNA_6120: 14488 - K05954 FNTB protein farnesyltransferase subunit beta, at 41541 to 43349
14488
mRNA_6121: 14489 - KOG3607 Meltrins, fertilins and related Zn-dependent metalloproteinases of the ADAMs family, at 49647 to 51616
14489
mRNA_6122: 14490 - SUPERFAMILY--SSF53098, at 54138 to 56327
14490
Group
Condition
mRNA_6118
mRNA_6119
mRNA_6120
mRNA_6121
mRNA_6122
14486
14487
14488
14489
14490
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.3
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
-0.7
0.8
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.7
-0.3
growth on oleic acid
YNB Glucose
-0.0
-0.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
0.5
-0.8
growth on oleic acid
YNB Oleic Acid
0.1
-0.3
-0.2
growth on ypd
YPD
0.1
-0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.5
-0.7
auxotrophy
Dropout Complete
-0.1
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.5
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.6
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.5
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.3
0.3
growth on ricinoleic acid
YNB Glucose
-0.0
0.4
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.4
-0.2
auxotrophy
YNB Glucose
-0.1
0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.2
0.3
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