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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6097: 14465 - KOG4313 Thiamine pyrophosphokinase, at 1649855 to 1650926
14465
mRNA_6098: 14466 - Hypothetical Protein, at 1650889 to 1652213
14466
mRNA_6099: 14467 - KOG3091 Nuclear pore complex, p54 component (sc Nup57), at 1652457 to 1654232
14467
mRNA_6100: 14468 - Hypothetical Protein, at 1655150 to 1656189
14468
mRNA_6101: 14469 - KOG1303 Amino acid transporters, at 1657479 to 1659479
14469
Group
Condition
mRNA_6097
mRNA_6098
mRNA_6099
mRNA_6100
mRNA_6101
14465
14466
14467
14468
14469
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
-0.2
-0.2
auxotrophy
YNB Glucose
0.2
0.1
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.2
0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.1
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.3
0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
0.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
-0.0
-0.2
growth on ricinoleic acid
YNB Glucose
0.4
-0.2
0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.0
0.1
0.3
auxotrophy
Dropout Complete
0.4
0.4
-0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.5
0.7
0.1
growth on ypd
YPD
-0.0
-0.1
0.7
0.0
growth on oleic acid
YNB Oleic Acid
0.2
0.3
0.4
-0.1
growth on oleic acid
YNB Glucose
0.3
0.4
0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
0.4
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
0.2
0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
0.7
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.4
0.6
0.5
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