Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1631626 to 1633865 14461 mRNA_6094: 14462 - K16738 NDE1, NUDE nuclear distribution protein NudE, at 1634041 to 1636155 14462 mRNA_6095: 14463 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1636949 to 1643604 14463 mRNA_6096: 14464 - K05721 FGD2 FYVE, RhoGEF and PH domain containing 2, at 1644523 to 1649566 14464 mRNA_6097: 14465 - KOG4313 Thiamine pyrophosphokinase, at 1649855 to 1650926 14465
Group Condition mRNA_6093 mRNA_6094 mRNA_6095 mRNA_6096 mRNA_6097
14461
14462
14463
14464
14465
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.4 0.0 -0.1
growth on ypd YPD -0.1 -0.2 0.1 0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -0.3 0.2 0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.0 0.2 0.2 0.2
auxotrophy Dropout Complete -0.2 -0.3 0.3 -0.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 0.1 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.2 0.2 0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 -0.0 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0 0.2 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.0 0.3 0.0
auxotrophy YNB Glucose 0.1 -0.0 0.2 0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.5 -0.0 0.1
growth on oleic acid YNB Glucose -0.1 0.1 0.2 0.0 0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.2 0.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.4 0.4 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.4 0.3 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.2 0.3 0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.1 0.1 -0.0 0.8
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.0 0.3 0.4 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.5 0.3 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.5 0.1 0.5 -0.0
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