Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460 mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1631626 to 1633865 14461 mRNA_6094: 14462 - K16738 NDE1, NUDE nuclear distribution protein NudE, at 1634041 to 1636155 14462 mRNA_6095: 14463 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 1636949 to 1643604 14463 mRNA_6096: 14464 - K05721 FGD2 FYVE, RhoGEF and PH domain containing 2, at 1644523 to 1649566 14464
Group Condition mRNA_6092 mRNA_6093 mRNA_6094 mRNA_6095 mRNA_6096
14460
14461
14462
14463
14464
growth on ypd YPD -0.1 -0.1 -0.2 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 0.1 -0.4 0.0
auxotrophy Dropout Complete 0.2 -0.2 -0.3 0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.1 -0.2 -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.3 -0.1 0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.0 -0.0 0.0
growth on oleic acid YNB Oleic Acid 0.2 -0.4 -0.0 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.0 -0.2 0.2 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 -0.0 0.2 0.1
growth on oleic acid YNB Glucose 0.3 -0.1 0.1 0.2 0.0
auxotrophy YNB Glucose 0.3 0.1 -0.0 0.2 0.0
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1 0.1 -0.0 0.3
growth on ricinoleic acid YNB Glucose 0.4 0.1 -0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.1 0.1 0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 0.0 -0.1 0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.5 0.2 0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.4 0.5 0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.0 0.4 0.3 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.2 0.4 0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.3 -0.0 0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.2 0.5 0.3 0.2
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