Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6089: 14457 - KOG3098 Uncharacterized conserved protein, at 1622140 to 1623844 14457 mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1624462 to 1625947 14458 mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1626072 to 1627990 14459 mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460 mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1631626 to 1633865 14461
Group Condition mRNA_6089 mRNA_6090 mRNA_6091 mRNA_6092 mRNA_6093
14457
14458
14459
14460
14461
growth on oleic acid YNB Oleic Acid -0.1 -0.4 -0.2 0.2 -0.4
growth on oleic acid YNB Glucose -0.3 -0.3 -0.3 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.4 0.3 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 -0.1 0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.3 -0.4 -0.2 0.3
auxotrophy Dropout Complete -0.1 -0.0 0.3 0.2 -0.2
growth on ypd YPD 0.1 0.0 0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 0.0 0.2 -0.0
auxotrophy YNB Glucose -0.1 -0.1 0.0 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.0 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.3 0.0 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0 0.4 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.3 0.2 -0.4 0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 0.3 0.3 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.5 -0.1 0.0 0.5
growth on ricinoleic acid YNB Glucose 0.4 -0.3 0.3 0.4 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.4 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.0 0.1 0.4 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.1 0.3 0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.0 0.2 0.6 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.5 0.5 0.8 0.0
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