Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6088: 14456 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1619714 to 1621699 14456 mRNA_6089: 14457 - KOG3098 Uncharacterized conserved protein, at 1622140 to 1623844 14457 mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1624462 to 1625947 14458 mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1626072 to 1627990 14459 mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460
Group Condition mRNA_6088 mRNA_6089 mRNA_6090 mRNA_6091 mRNA_6092
14456
14457
14458
14459
14460
growth on oleic acid YNB Glucose -0.2 -0.3 -0.3 -0.3 0.3
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.4 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 -0.1 -0.4 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 0.3 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 0.3 0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.4 -0.0 -0.1 0.5
growth on ypd YPD -0.1 0.1 0.0 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 0.3 0.0 -0.0
auxotrophy YNB Glucose 0.1 -0.1 -0.1 0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.2 0.5 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 0.2 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.1 0.0 0.2
auxotrophy Dropout Complete 0.1 -0.1 -0.0 0.3 0.2
growth on ricinoleic acid YNB Glucose -0.3 0.4 -0.3 0.3 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 -0.0 0.4 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 0.1 0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.3 0.0 0.1 0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.1 0.4 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.3 -0.0 0.2 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.5 -0.5 0.5 0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.5 0.1 0.3 0.4
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