Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6080: 14448 - KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans), at 1596741 to 1598901 14448 mRNA_6081: 14449 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1598988 to 1602551 14449 mRNA_6082: 14450 - K03010 RPB2, POLR2B DNA-directed RNA polymerase II subunit RPB2, at 1603316 to 1607774 14450 mRNA_6083: 14451 - Hypothetical Protein, at 1607969 to 1610179 14451 mRNA_6084: 14452 - SUPERFAMILY--SSF54427, at 1610344 to 1611077 14452
Group Condition mRNA_6080 mRNA_6081 mRNA_6082 mRNA_6083 mRNA_6084
14448
14449
14450
14451
14452
growth on ypd YPD   -0.0   -0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy   0.2   -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.2   -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1   0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.2   -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.4   -0.5 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0   -0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2   0.2 -0.3
growth on oleic acid YNB Oleic Acid   -0.1   0.3 -0.1
growth on ricinoleic acid YNB Glucose   0.2   0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.3   0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.1   -0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.3   -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0   0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate   0.1   -0.0 0.4
auxotrophy YNB Glucose 75mM Arginine   0.2   0.3 0.0
auxotrophy YNB Glucose   0.0   0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2   0.1 0.3
growth on oleic acid YNB Glucose   0.2   0.5 -0.0
auxotrophy Dropout Complete   0.0   0.4 0.3
auxotrophy YNB Glucose 75mM Methionine   0.2   0.3 0.3
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