Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6077: 14445 - KOG3869 Uncharacterized conserved protein, at 1590853 to 1592368 14445 mRNA_6078: 14446 - HMMPfam-Essential protein Yae1, N terminal-PF09811, at 1592607 to 1593994 14446 mRNA_6079: 14447 - K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1, at 1594108 to 1596398 14447 mRNA_6080: 14448 - KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans), at 1596741 to 1598901 14448 mRNA_6081: 14449 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1598988 to 1602551 14449
Group Condition mRNA_6077 mRNA_6078 mRNA_6079 mRNA_6080 mRNA_6081
14445
14446
14447
14448
14449
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 -0.4   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.4   0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 -0.1   0.4
auxotrophy Dropout Complete   -0.1 -0.1   0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 -0.2   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.1   -0.1
growth on ypd YPD   0.3 -0.3   -0.0
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.2   0.2
auxotrophy YNB Glucose   0.2 -0.1   0.0
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.1   0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.1   0.1
growth on oleic acid YNB Glucose   0.2 -0.2   0.2
auxotrophy YNB Glucose 75mM Arginine   0.3 -0.2   0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.1   0.3
growth on oleic acid YNB Oleic Acid   0.5 -0.2   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 0.0   0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.5 -0.2   0.1
ypd buoyancy 40 hrs Low Buoyancy   0.2 -0.0   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 -0.0   0.2
growth on ricinoleic acid YNB Glucose   0.6 -0.2   0.2
ypd buoyancy 40 hrs High Buoyancy   0.4 -0.0   0.2
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