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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6076: 14444 - Hypothetical Protein, at 1586700 to 1586903
14444
mRNA_6077: 14445 - KOG3869 Uncharacterized conserved protein, at 1590853 to 1592368
14445
mRNA_6078: 14446 - HMMPfam-Essential protein Yae1, N terminal-PF09811, at 1592607 to 1593994
14446
mRNA_6079: 14447 - K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1, at 1594108 to 1596398
14447
mRNA_6080: 14448 - KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans), at 1596741 to 1598901
14448
Group
Condition
mRNA_6076
mRNA_6077
mRNA_6078
mRNA_6079
mRNA_6080
14444
14445
14446
14447
14448
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.4
auxotrophy
Dropout Complete
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
growth on ypd
YPD
0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
growth on oleic acid
YNB Glucose
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
auxotrophy
YNB Glucose
0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.2
growth on oleic acid
YNB Oleic Acid
0.5
-0.2
growth on ricinoleic acid
YNB Glucose
0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.0
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