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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1561677 to 1562701
14434
mRNA_6067: 14435 - K14798 LTV1 protein LTV1, at 1562800 to 1564980
14435
mRNA_6068: 14436 - K01855 PUS3, DEG1 tRNA pseudouridine38/39 synthase, at 1565230 to 1567371
14436
mRNA_6069: 14437 - KOG0198 MEKK and related serine/threonine protein kinases, at 1567592 to 1572715
14437
mRNA_6070: 14438 - K14552 NAN1, UTP17, WDR75 NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17), at 1572879 to 1575986
14438
Group
Condition
mRNA_6066
mRNA_6067
mRNA_6068
mRNA_6069
mRNA_6070
14434
14435
14436
14437
14438
auxotrophy
YNB Glucose
-0.8
-0.0
growth on oleic acid
YNB Oleic Acid
-0.6
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
growth on oleic acid
YNB Glucose
-0.2
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
auxotrophy
Dropout Complete
0.0
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
growth on ypd
YPD
0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.4
growth on ricinoleic acid
YNB Glucose
0.4
0.2
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