Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1560376 to 1561281 14433 mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1561677 to 1562701 14434 mRNA_6067: 14435 - K14798 LTV1 protein LTV1, at 1562800 to 1564980 14435 mRNA_6068: 14436 - K01855 PUS3, DEG1 tRNA pseudouridine38/39 synthase, at 1565230 to 1567371 14436 mRNA_6069: 14437 - KOG0198 MEKK and related serine/threonine protein kinases, at 1567592 to 1572715 14437
Group Condition mRNA_6065 mRNA_6066 mRNA_6067 mRNA_6068 mRNA_6069
14433
14434
14435
14436
14437
auxotrophy YNB Glucose -0.4     -0.8 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5     -0.4 -0.2
growth on oleic acid YNB Oleic Acid -0.0     -0.6 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.5     -0.1 0.1
auxotrophy Dropout Complete -0.4     0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.4 -0.0
growth on oleic acid YNB Glucose -0.2     -0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5     0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1     -0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     -0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3     -0.3 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2     0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1     -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     0.1 -0.0
growth on ypd YPD -0.1     0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     0.2 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3     0.1 0.4
growth on ricinoleic acid YNB Glucose -0.2     0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1     0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     0.0 0.2
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