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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6064: 14432 - Hypothetical Protein, at 1556373 to 1558599
14432
mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1560376 to 1561281
14433
mRNA_6066: 14434 - K20363 YIP1, YIPF5 protein transport protein YIP1, at 1561677 to 1562701
14434
mRNA_6067: 14435 - K14798 LTV1 protein LTV1, at 1562800 to 1564980
14435
mRNA_6068: 14436 - K01855 PUS3, DEG1 tRNA pseudouridine38/39 synthase, at 1565230 to 1567371
14436
Group
Condition
mRNA_6064
mRNA_6065
mRNA_6066
mRNA_6067
mRNA_6068
14432
14433
14434
14435
14436
auxotrophy
YNB Glucose
0.0
-0.4
-0.8
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.5
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.1
-0.4
growth on oleic acid
YNB Glucose
-0.0
-0.2
-0.2
auxotrophy
Dropout Complete
0.0
-0.4
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.5
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.1
0.2
growth on ypd
YPD
-0.1
-0.1
0.3
growth on ricinoleic acid
YNB Glucose
0.0
-0.2
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.2
0.0
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