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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1548729 to 1549422
14429
mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1549948 to 1551724
14430
mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1552010 to 1556333
14431
mRNA_6064: 14432 - Hypothetical Protein, at 1556373 to 1558599
14432
mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1560376 to 1561281
14433
Group
Condition
mRNA_6061
mRNA_6062
mRNA_6063
mRNA_6064
mRNA_6065
14429
14430
14431
14432
14433
growth on ypd
YPD
-0.3
-0.4
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.1
-0.1
-0.5
auxotrophy
YNB Glucose
-0.2
-0.2
-0.0
0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.2
-0.0
0.0
-0.5
auxotrophy
Dropout Complete
-0.2
-0.1
0.1
0.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
0.2
0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
-0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.1
0.3
-0.0
-0.3
growth on oleic acid
YNB Glucose
0.1
-0.2
0.1
-0.0
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
0.1
0.1
0.0
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.3
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.4
0.0
0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
-0.0
-0.1
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.1
-0.1
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.7
-0.2
0.0
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.4
0.2
-0.0
-0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.5
0.0
-0.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
0.1
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.4
0.1
0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.3
0.1
0.3
0.2
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