Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1548729 to 1549422 14429 mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1549948 to 1551724 14430 mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1552010 to 1556333 14431 mRNA_6064: 14432 - Hypothetical Protein, at 1556373 to 1558599 14432 mRNA_6065: 14433 - KOG1082 Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing, at 1560376 to 1561281 14433
Group Condition mRNA_6061 mRNA_6062 mRNA_6063 mRNA_6064 mRNA_6065
14429
14430
14431
14432
14433
growth on ypd YPD -0.3 -0.4 -0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 -0.1 -0.5
auxotrophy YNB Glucose -0.2 -0.2 -0.0 0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 -0.0 0.0 -0.5
auxotrophy Dropout Complete -0.2 -0.1 0.1 0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 0.2 0.0 -0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.1 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.1 0.3 -0.0 -0.3
growth on oleic acid YNB Glucose 0.1 -0.2 0.1 -0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.2 0.1 0.1 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.4 0.0 0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.0 -0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.1 -0.1 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.7 -0.2 0.0 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.2 -0.0 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.5 0.0 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 0.1 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 0.1 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.3 0.1 0.3 0.2
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