Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6059: 14427 - SUPERFAMILY--SSF52047, at 1543443 to 1544992 14427 mRNA_6060: 14428 - K14806 DDX31, DBP7 ATP-dependent RNA helicase DDX31/DBP7, at 1545467 to 1548419 14428 mRNA_6061: 14429 - KOG3772 M-phase inducer phosphatase, at 1548729 to 1549422 14429 mRNA_6062: 14430 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 1549948 to 1551724 14430 mRNA_6063: 14431 - KOG0519 Sensory transduction histidine kinase, at 1552010 to 1556333 14431
Group Condition mRNA_6059 mRNA_6060 mRNA_6061 mRNA_6062 mRNA_6063
14427
14428
14429
14430
14431
growth on ypd YPD 0.2   -0.3 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.1   -0.2 -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0   -0.1 -0.2 -0.1
auxotrophy YNB Glucose 0.2   -0.2 -0.2 -0.0
auxotrophy Dropout Complete -0.0   -0.2 -0.1 0.1
growth on oleic acid YNB Glucose 0.0   0.1 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -0.3 -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.3 0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -0.3 0.1 0.3
growth on ricinoleic acid YNB Glucose 0.4   -0.2 0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.2 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0   -0.1 0.5 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.0 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.4 0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   0.2 0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   0.1 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2   0.7 -0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   0.5 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.2 0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.3   0.7 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   0.4 0.4 0.0
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