Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6047: 14415 - K17268 COPE coatomer subunit epsilon, at 1515323 to 1516944 14415 mRNA_6048: 14416 - Interpro WSTF, HB1, Itc1p, MBD9 motif 1, at 1517232 to 1519356 14416 mRNA_6049: 14417 - K08517 SEC22 vesicle transport protein SEC22, at 1519896 to 1521308 14417 mRNA_6050: 14418 - K03942 NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, at 1521571 to 1523726 14418 mRNA_6051: 14419 - Hypothetical Protein, at 1524087 to 1525475 14419
Group Condition mRNA_6047 mRNA_6048 mRNA_6049 mRNA_6050 mRNA_6051
14415
14416
14417
14418
14419
auxotrophy Dropout Complete -1.2 0.3 -0.1   -0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.1 -0.3   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 0.0 -0.0   0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0 -0.1   -0.3
growth on ricinoleic acid YNB Glucose -0.8 0.2 0.0   -0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 0.1 0.1   -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 -0.5   -0.0
auxotrophy YNB Glucose -0.3 0.2 0.0   -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4 0.3   -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.4 1.0   -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 0.0   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.2 -0.4   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 0.0   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.0 -0.0   0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2 0.1   -0.1
growth on oleic acid YNB Glucose -0.4 0.5 0.1   -0.1
growth on oleic acid YNB Oleic Acid -0.3 0.0 0.8   -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 0.4   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.0 0.2   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.3 0.0   -0.2
growth on ypd YPD -0.4 0.5 0.2   0.3
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