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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6046: 14414 - Hypothetical Protein, at 1513700 to 1515000
14414
mRNA_6047: 14415 - K17268 COPE coatomer subunit epsilon, at 1515323 to 1516944
14415
mRNA_6048: 14416 - Interpro WSTF, HB1, Itc1p, MBD9 motif 1, at 1517232 to 1519356
14416
mRNA_6049: 14417 - K08517 SEC22 vesicle transport protein SEC22, at 1519896 to 1521308
14417
mRNA_6050: 14418 - K03942 NDUFV1 NADH dehydrogenase (ubiquinone) flavoprotein 1, at 1521571 to 1523726
14418
Group
Condition
mRNA_6046
mRNA_6047
mRNA_6048
mRNA_6049
mRNA_6050
14414
14415
14416
14417
14418
auxotrophy
Dropout Complete
0.0
-1.2
0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.6
0.1
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.8
0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.6
0.1
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-1.1
0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.3
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.2
-0.1
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.3
0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.4
0.1
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.2
-0.4
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
-0.4
1.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
0.1
-0.1
-0.5
growth on oleic acid
YNB Glucose
-0.1
-0.4
0.5
0.1
auxotrophy
YNB Glucose
0.2
-0.3
0.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.3
0.0
0.8
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.0
0.2
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.0
0.0
0.2
growth on ypd
YPD
0.5
-0.4
0.5
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.2
0.3
0.0
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