Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6027: 14395 - HMMPfam-Cysteine-rich secretory protein family-PF00188,PRINTS-Allergen V5/Tpx-1 family signature-PR00837,SMART-SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.-SM00198,SUPERFAMILY--SSF55797, at 1478977 to 1480198 14395 mRNA_6028: 14396 - KOG2521 Uncharacterized conserved protein, at 1480225 to 1481311 14396 mRNA_6029: 14397 - K01056 PTH1, pth, spoVC peptidyl-tRNA hydrolase, PTH1 family, at 1481515 to 1482449 14397 mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1482702 to 1483838 14398 mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1484173 to 1485684 14399
Group Condition mRNA_6027 mRNA_6028 mRNA_6029 mRNA_6030 mRNA_6031
14395
14396
14397
14398
14399
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 0.2   0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.0   -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.1   0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.6 -0.1   0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.2 0.3   0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.0   0.1 0.1
auxotrophy Dropout Complete -0.1 -0.0   -0.0 0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0   0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0   0.3 -0.2
auxotrophy YNB Glucose 0.0 0.1   0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1   0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.0   -0.0 0.3
growth on oleic acid YNB Glucose 0.1 0.2   0.4 -0.3
growth on ricinoleic acid YNB Glucose 0.2 0.2   0.2 -0.2
growth on ypd YPD 0.2 -0.1   -0.0 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.3   0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.6 0.0   -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.4   0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1 0.0   -0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.1 0.2   -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.7 0.0   0.4 0.0
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