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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1442140 to 1444838
14377
mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1444950 to 1447121
14378
mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1447630 to 1450531
14379
mRNA_6012: 14380 - Hypothetical Protein, at 1451012 to 1452136
14380
mRNA_6013: 14381 - Hypothetical Protein, at 1452462 to 1453877
14381
Group
Condition
mRNA_6009
mRNA_6010
mRNA_6011
mRNA_6012
mRNA_6013
14377
14378
14379
14380
14381
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
-0.1
0.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
-0.6
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.1
-0.4
-0.5
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.3
-0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
-0.4
-0.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.3
0.1
auxotrophy
Dropout Complete
-0.1
-0.1
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.3
0.0
-0.3
-0.4
auxotrophy
YNB Glucose
0.0
0.1
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.7
0.3
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
0.1
0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.1
-0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.4
0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.3
0.4
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.1
0.4
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.5
0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.0
0.6
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.3
-0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
0.4
0.2
-0.5
growth on ypd
YPD
-0.3
0.7
0.3
0.3
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