Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1442140 to 1444838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1444950 to 1447121 14378 mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1447630 to 1450531 14379 mRNA_6012: 14380 - Hypothetical Protein, at 1451012 to 1452136 14380 mRNA_6013: 14381 - Hypothetical Protein, at 1452462 to 1453877 14381
Group Condition mRNA_6009 mRNA_6010 mRNA_6011 mRNA_6012 mRNA_6013
14377
14378
14379
14380
14381
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.8 -0.1 0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.5 -0.2 -0.6 0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.3 0.1 -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine   0.2 -0.3 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy   -0.3 0.3 -0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid   0.1 -0.4 -0.4 -0.0
growth on ricinoleic acid YNB Glucose   -0.1 -0.2 -0.3 0.1
auxotrophy Dropout Complete   -0.1 -0.1 -0.1 -0.1
growth on oleic acid YNB Glucose   0.3 0.0 -0.3 -0.4
auxotrophy YNB Glucose   0.0 0.1 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.7 0.3 -0.1 0.3
growth on oleic acid YNB Oleic Acid   0.1 0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.0 0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 0.4 0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 0.3 0.4 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.3 0.1 0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.5 0.3 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 -0.0 0.6 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.5 0.3 -0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 0.4 0.2 -0.5
growth on ypd YPD   -0.3 0.7 0.3 0.3
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