Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6008: 14376 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 1440694 to 1441642 14376 mRNA_6009: 14377 - K13939 FOL1 dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase, at 1442140 to 1444838 14377 mRNA_6010: 14378 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF103473, at 1444950 to 1447121 14378 mRNA_6011: 14379 - HMMPfam-F-box-like-PF12937, at 1447630 to 1450531 14379 mRNA_6012: 14380 - Hypothetical Protein, at 1451012 to 1452136 14380
Group Condition mRNA_6008 mRNA_6009 mRNA_6010 mRNA_6011 mRNA_6012
14376
14377
14378
14379
14380
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -0.5 -0.2 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.7 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3 0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.8 -0.1 0.0
auxotrophy Dropout Complete -0.2   -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.1 -0.4 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.0   0.2 -0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.2   -0.1 -0.2 -0.3
growth on oleic acid YNB Glucose -0.2   0.3 0.0 -0.3
auxotrophy YNB Glucose 0.1   0.0 0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.1   0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1   0.0 0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.3 0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.4 0.3 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.3 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.3 -0.0 0.6
growth on ypd YPD -0.2   -0.3 0.7 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6   -0.2 0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.5 0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.1 0.5 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.6 0.4 0.2
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