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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5997: 14365 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1412411 to 1414490
14365
mRNA_5998: 14366 - Hypothetical Protein, at 1414983 to 1417635
14366
mRNA_5999: 14367 - KOG1064 RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily, at 1417778 to 1422818
14367
mRNA_6000: 14368 - KOG2517 Ribulose kinase and related carbohydrate kinases, at 1423087 to 1425937
14368
mRNA_6001: 14369 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1426118 to 1427755
14369
Group
Condition
mRNA_5997
mRNA_5998
mRNA_5999
mRNA_6000
mRNA_6001
14365
14366
14367
14368
14369
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-3.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.1
-1.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.0
-0.7
0.2
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.1
-0.3
0.0
-0.1
auxotrophy
YNB Glucose
0.2
-0.4
-0.1
0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.3
0.0
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
-0.9
0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
0.6
-0.7
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.0
-0.2
-0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.3
-0.4
0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.3
0.3
-0.2
0.1
auxotrophy
Dropout Complete
-0.1
-0.3
0.2
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.1
0.5
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.0
-0.2
-0.0
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
0.1
-0.0
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
0.9
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
0.4
0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
0.3
0.4
0.0
growth on oleic acid
YNB Glucose
0.2
0.1
0.4
-0.2
0.3
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
1.1
0.0
0.1
growth on ypd
YPD
0.3
0.1
1.0
0.4
-0.0
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