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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5989: 14357 - SUPERFAMILY--SSF52047, at 1392588 to 1397872
14357
mRNA_5990: 14358 - Hypothetical Protein, at 1398213 to 1398410
14358
mRNA_5991: 14359 - Hypothetical Protein, at 1398827 to 1400392
14359
mRNA_5992: 14360 - Hypothetical Protein, at 1400743 to 1402011
14360
mRNA_5993: 14361 - K12847 USP39, SAD1 U4/U6.U5 tri-snRNP-associated protein 2, at 1402184 to 1404821
14361
Group
Condition
mRNA_5989
mRNA_5990
mRNA_5991
mRNA_5992
mRNA_5993
14357
14358
14359
14360
14361
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.5
-3.5
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.6
-1.0
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.9
0.0
auxotrophy
YNB Glucose
0.0
-0.8
-0.3
0.2
auxotrophy
Dropout Complete
0.0
-0.5
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.4
-0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.0
0.3
-0.6
0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.2
0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
-0.6
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.7
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.6
-0.3
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.5
-0.6
0.3
growth on oleic acid
YNB Glucose
0.2
-0.1
0.4
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.5
0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.2
0.3
0.1
growth on ypd
YPD
0.1
1.7
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.9
0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
1.0
0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.8
0.6
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
1.5
0.2
0.4
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