Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1369573 to 1370035 14347 mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1370321 to 1371409 14348 mRNA_5981: 14349 - Hypothetical Protein, at 1371994 to 1372598 14349 mRNA_5982: 14350 - KOG0379 Kelch repeat-containing proteins, at 1373446 to 1378307 14350 mRNA_5983: 14351 - Hypothetical Protein, at 1379005 to 1379613 14351
Group Condition mRNA_5979 mRNA_5980 mRNA_5981 mRNA_5982 mRNA_5983
14347
14348
14349
14350
14351
ypd buoyancy 40 hrs No Buoyancy Separation   -2.0 -3.0 0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 0.0 0.1 -0.3
auxotrophy YNB Glucose   -0.6 0.0 0.3 -0.2
auxotrophy Dropout Complete   -0.7 -0.0 0.2 0.4
ypd buoyancy 40 hrs High Buoyancy   -0.2 -0.3 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.2 0.3 0.2 -0.3
growth on ypd YPD   0.5 -0.5 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.4 -0.2 0.1 0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.0 0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 0.3 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2 0.2 0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 0.6 0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 0.3 -0.1 -0.3
growth on oleic acid YNB Glucose   0.2 -0.1 0.3 0.3
facs on lipid accumulation Sorted No BODIPY Gate   0.9 -0.2 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.1 0.2 0.8
growth on oleic acid YNB Oleic Acid   0.3 -0.0 0.3 0.6
facs on lipid accumulation Sorted High BODIPY Gate   0.6 0.0 0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid   0.1 0.5 0.3 0.7
growth on ricinoleic acid YNB Glucose   0.2 0.5 0.4 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid   0.9 0.6 0.4 0.3
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