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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5975: 14343 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1361032 to 1363169
14343
mRNA_5976: 14344 - SUPERFAMILY--SSF52047, at 1363510 to 1364859
14344
mRNA_5977: 14345 - HMMPfam-F-box-like-PF12937, at 1365252 to 1367121
14345
mRNA_5978: 14346 - Hypothetical Protein, at 1367846 to 1369331
14346
mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1369573 to 1370035
14347
Group
Condition
mRNA_5975
mRNA_5976
mRNA_5977
mRNA_5978
mRNA_5979
14343
14344
14345
14346
14347
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.8
0.0
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
-0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
-0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.4
0.1
auxotrophy
YNB Glucose
0.3
-0.4
0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.4
-0.4
1.0
growth on oleic acid
YNB Oleic Acid
0.2
0.2
0.4
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
0.4
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.5
0.0
1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.2
-0.1
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.4
0.2
-0.0
auxotrophy
Dropout Complete
0.6
-0.3
0.4
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.0
0.5
0.1
growth on oleic acid
YNB Glucose
0.4
0.2
0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.3
0.4
0.2
growth on ricinoleic acid
YNB Glucose
0.3
0.5
0.2
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
0.1
1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.5
0.3
0.6
growth on ypd
YPD
0.4
0.2
0.3
0.7
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