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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5958: 14326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1331460 to 1334052
14326
mRNA_5959: 14327 - HMMPfam-Domain of unknown function (DUF1793)-PF08760, at 1334549 to 1337487
14327
mRNA_5960: 14328 - Hypothetical Protein, at 1337799 to 1338235
14328
mRNA_5961: 14329 - HMMPfam-F-box-like-PF12937, at 1338459 to 1339688
14329
mRNA_5962: 14330 - Hypothetical Protein, at 1340346 to 1341615
14330
Group
Condition
mRNA_5958
mRNA_5959
mRNA_5960
mRNA_5961
mRNA_5962
14326
14327
14328
14329
14330
growth on oleic acid
YNB Oleic Acid
-0.0
0.3
-0.5
-0.0
-0.0
auxotrophy
YNB Glucose
-0.1
-0.3
-0.2
0.1
0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
0.1
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.2
0.0
0.2
0.1
growth on oleic acid
YNB Glucose
-0.1
-0.0
-0.0
-0.0
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.2
-0.1
0.4
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.5
-0.7
0.7
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.2
-0.2
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.0
0.2
-0.1
-0.1
auxotrophy
Dropout Complete
-0.1
-0.2
0.1
0.1
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
0.5
-0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
0.4
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.1
-0.1
0.2
0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
0.0
0.2
0.6
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
0.3
-0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.2
-0.0
0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.7
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
0.2
0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.0
0.5
0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.2
0.3
0.3
0.1
growth on ypd
YPD
0.5
0.3
0.1
0.0
0.4
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