Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5955: 14323 - K11654 SMARCA5, SNF2H, ISWI SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, at 1319797 to 1323881 14323 mRNA_5956: 14324 - KOG2238 Uncharacterized conserved protein TEX2, contains PH domain, at 1324543 to 1328402 14324 mRNA_5957: 14325 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 1329239 to 1331004 14325 mRNA_5958: 14326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1331460 to 1334052 14326 mRNA_5959: 14327 - HMMPfam-Domain of unknown function (DUF1793)-PF08760, at 1334549 to 1337487 14327
Group Condition mRNA_5955 mRNA_5956 mRNA_5957 mRNA_5958 mRNA_5959
14323
14324
14325
14326
14327
auxotrophy YNB Glucose   0.0 0.0 -0.1 -0.3
auxotrophy Dropout Complete   0.0 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.2 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0 0.2 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine   0.1 -0.1 -0.0 -0.1
growth on oleic acid YNB Glucose   0.1 0.0 -0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.2 0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.0 0.3 -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.3 0.1 -0.2
growth on ypd YPD   -0.1 -0.5 0.5 0.3
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.1 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate   0.0 0.4 -0.2 0.1
growth on ricinoleic acid YNB Glucose   0.3 0.3 -0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.3 -0.2 0.1
growth on oleic acid YNB Oleic Acid   0.0 0.1 -0.0 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 0.2 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 0.2 0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.4 0.3 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 0.3 0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 0.6 -0.2 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.5 0.4 0.2 0.2
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