Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5954: 14322 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 1317942 to 1318810 14322 mRNA_5955: 14323 - K11654 SMARCA5, SNF2H, ISWI SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, at 1319797 to 1323881 14323 mRNA_5956: 14324 - KOG2238 Uncharacterized conserved protein TEX2, contains PH domain, at 1324543 to 1328402 14324 mRNA_5957: 14325 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 1329239 to 1331004 14325 mRNA_5958: 14326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1331460 to 1334052 14326
Group Condition mRNA_5954 mRNA_5955 mRNA_5956 mRNA_5957 mRNA_5958
14322
14323
14324
14325
14326
auxotrophy YNB Glucose -0.4   0.0 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0   -0.1 -0.2 0.1
growth on ypd YPD -0.0   -0.1 -0.5 0.5
auxotrophy Dropout Complete -0.0   0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3   0.0 0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.0 0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.1   0.0 0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0   0.1 -0.1 -0.0
growth on oleic acid YNB Glucose 0.0   0.1 0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3   -0.1 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2   -0.0 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.2 0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6   0.4 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.0 0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.3   0.0 -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.0   0.3 0.3 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   0.1 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   0.1 0.4 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   0.2 0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.5 0.4 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   0.3 0.3 0.3
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