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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5948: 14316 - HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356, at 1303532 to 1306602
14316
mRNA_5949: 14317 - K01046 E3.1.1.3 triacylglycerol lipase, at 1307472 to 1308620
14317
mRNA_5950: 14318 - KOG2130 Phosphatidylserine-specific receptor PtdSerR, contains JmjC domain, at 1310261 to 1312291
14318
mRNA_5951: 14319 - HMMPfam-Peptidase of plants and bacteria-PF04450, at 1312489 to 1313415
14319
mRNA_5952: 14320 - K15198 BDP1, TFC5 transcription factor TFIIIB component B'', at 1313767 to 1316568
14320
Group
Condition
mRNA_5948
mRNA_5949
mRNA_5950
mRNA_5951
mRNA_5952
14316
14317
14318
14319
14320
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
0.1
auxotrophy
Dropout Complete
-0.1
-0.5
0.0
auxotrophy
YNB Glucose
-0.3
-0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.2
0.3
growth on ypd
YPD
0.7
0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.0
-0.1
growth on oleic acid
YNB Glucose
0.4
0.0
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
0.4
0.1
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