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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5936: 14304 - HMMPfam-Homeobox domain-PF00046,HMMPfam-Predicted membrane protein (DUF2231)-PF09990,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1272303 to 1276279
14304
mRNA_5937: 14305 - Hypothetical Protein, at 1276675 to 1277757
14305
mRNA_5938: 14306 - Hypothetical Protein, at 1278732 to 1279189
14306
mRNA_5939: 14307 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1279291 to 1281884
14307
mRNA_5940: 14308 - KOG3975 Uncharacterized conserved protein, at 1282291 to 1283820
14308
Group
Condition
mRNA_5936
mRNA_5937
mRNA_5938
mRNA_5939
mRNA_5940
14304
14305
14306
14307
14308
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.4
0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
-0.6
0.3
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.4
0.3
0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.2
-0.7
0.4
-0.2
auxotrophy
Dropout Complete
0.1
0.0
0.2
-0.1
-0.1
growth on ypd
YPD
-0.1
-0.2
0.2
0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
-0.0
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
-0.0
0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.4
-0.6
0.2
0.1
auxotrophy
YNB Glucose
0.1
-0.1
0.3
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.6
-0.2
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
0.0
0.1
0.4
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.5
-0.4
0.2
0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.1
0.2
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.2
0.2
-0.1
0.4
growth on oleic acid
YNB Glucose
0.0
0.1
0.5
0.3
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.0
0.2
0.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.2
-0.1
0.0
0.4
growth on ricinoleic acid
YNB Glucose
0.3
-0.2
0.6
0.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.4
0.5
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.0
0.7
-0.0
0.5
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