Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5918: 14286 - K11498 CENPE centromeric protein E, at 1241220 to 1242760 14286 mRNA_5919: 14287 - KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma, at 1243346 to 1244488 14287 mRNA_5920: 14288 - K03022 RPC8, POLR3H DNA-directed RNA polymerase III subunit RPC8, at 1245035 to 1246181 14288 mRNA_5921: 14289 - K14789 NOP6 nucleolar protein 6, at 1246509 to 1247671 14289 mRNA_5922: 14290 - KOG2615 Permease of the major facilitator superfamily, at 1248033 to 1250292 14290
Group Condition mRNA_5918 mRNA_5919 mRNA_5920 mRNA_5921 mRNA_5922
14286
14287
14288
14289
14290
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.6   -1.5 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3   -1.0 -0.2
growth on ypd YPD -1.2 -0.0   -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.4   -0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3   -0.5 0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1   -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1   -0.5 -0.5
growth on oleic acid YNB Glucose -0.5 -0.1   -0.1 -0.0
auxotrophy YNB Glucose 0.7 -0.0   -0.9 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.4   0.3 -0.1
auxotrophy Dropout Complete 0.7 -0.1   -0.6 -0.4
growth on oleic acid YNB Oleic Acid -0.1 -0.4   0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine 1.0 -0.3   -0.6 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.0   0.2 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1   0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1   0.5 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1   -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.1   -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.4 0.2   -0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.3 0.3   -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.9 0.2   1.4 -0.1
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