Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5910: 14278 - K11094 SNRPB2 U2 small nuclear ribonucleoprotein B'', at 1222934 to 1224150 14278 mRNA_5911: 14279 - ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSitePatterns-EGF-like domain signature 2.-PS01186,ProSiteProfiles-EGF-like domain profile.-PS50026, at 1224353 to 1227750 14279 mRNA_5912: 14280 - K11375 ELP4 elongator complex protein 4, at 1228297 to 1229962 14280 mRNA_5913: 14281 - K14455 GOT2 aspartate aminotransferase, mitochondrial, at 1230072 to 1231795 14281 mRNA_5914: 14282 - HMMPfam-Nuclear protein Es2-PF09751, at 1232293 to 1234588 14282
Group Condition mRNA_5910 mRNA_5911 mRNA_5912 mRNA_5913 mRNA_5914
14278
14279
14280
14281
14282
facs on lipid accumulation Sorted High BODIPY Gate   0.3 -2.8 -0.3 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 0.0 -2.1 -0.9
auxotrophy Dropout Complete   -0.3 -1.3 -0.1 -1.1
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.4 -0.5 -1.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 -0.6 -1.0 -0.2
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.2 -0.3 -1.7
facs on lipid accumulation Sorted No BODIPY Gate   0.3 -1.3 -0.3 -0.5
auxotrophy YNB Glucose   -0.1 -0.4 -0.4 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation   -0.6 -1.6 0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 -2.2 0.4 0.7
growth on ypd YPD   -0.2 -1.4 -0.2 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 -1.8 -0.6 1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 -1.1 0.5 -0.3
growth on ricinoleic acid YNB Glucose   0.1 -0.8 -0.2 -0.1
growth on oleic acid YNB Oleic Acid   0.2 -0.5 -0.8 0.3
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -1.4 0.1 1.1
growth on oleic acid YNB Glucose   0.1 0.4 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.3 -0.0 -0.8 0.6
ypd buoyancy 40 hrs Median Buoyancy   -0.2 0.0 -0.0 0.5
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.0 -0.0 0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 -1.1 0.4 1.8
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