Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5904: 14272 - KOG4234 TPR repeat-containing protein, at 1211111 to 1212389 14272 mRNA_5905: 14273 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 1212592 to 1214577 14273 mRNA_5906: 14274 - KOG2568 Predicted membrane protein, at 1214923 to 1217024 14274 mRNA_5907: 14275 - K02726 PSMA2 20S proteasome subunit alpha 2, at 1217461 to 1218756 14275 mRNA_5908: 14276 - Hypothetical Protein, at 1218937 to 1220289 14276
Group Condition mRNA_5904 mRNA_5905 mRNA_5906 mRNA_5907 mRNA_5908
14272
14273
14274
14275
14276
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.4 -0.3   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 -0.3   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1   0.0
growth on ricinoleic acid YNB Glucose 0.1 -0.4 -0.1   0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.1 -0.0   -0.0
growth on oleic acid YNB Oleic Acid -0.2 0.0 -0.0   -0.2
growth on oleic acid YNB Glucose -0.1 -0.0 0.2   -0.2
growth on ypd YPD -0.1 -0.3 0.3   0.0
auxotrophy Dropout Complete 0.2 -0.3 0.2   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.2 -0.2   -0.0
auxotrophy YNB Glucose 0.0 -0.1 0.2   -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.1   -0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.0 -0.1   0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 0.0   -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.3 0.1   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 0.4   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 -0.2   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.4 -0.3   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.1 0.4   -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1 0.1   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.3 -0.1   0.1
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