Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5902: 14270 - K08336 ATG12 ubiquitin-like protein ATG12, at 1206662 to 1207258 14270 mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1207827 to 1210876 14271 mRNA_5904: 14272 - KOG4234 TPR repeat-containing protein, at 1211111 to 1212389 14272 mRNA_5905: 14273 - KOG1947 Leucine rich repeat proteins, some proteins contain F-box, at 1212592 to 1214577 14273 mRNA_5906: 14274 - KOG2568 Predicted membrane protein, at 1214923 to 1217024 14274
Group Condition mRNA_5902 mRNA_5903 mRNA_5904 mRNA_5905 mRNA_5906
14270
14271
14272
14273
14274
facs on lipid accumulation Sorted High BODIPY Gate -3.9 0.0 -0.1 -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -2.0 0.1 -0.0 0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -1.5 -0.1 0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.5 0.1 0.2 0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.1 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 -0.0 -0.4 -0.3
growth on ypd YPD -0.5 -0.0 -0.1 -0.3 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 -0.4 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.1 0.1 0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.8 0.0 0.3 0.1 0.1
growth on oleic acid YNB Oleic Acid -0.2 0.1 -0.2 0.0 -0.0
growth on oleic acid YNB Glucose -0.3 0.0 -0.1 -0.0 0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 0.3 -0.0 -0.1
growth on ricinoleic acid YNB Glucose 0.3 0.2 0.1 -0.4 -0.1
auxotrophy Dropout Complete 0.1 -0.0 0.2 -0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.0 0.2 -0.1 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 0.1 0.2 0.1 0.0
auxotrophy YNB Glucose 0.1 0.1 0.0 -0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1 0.3 0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 0.1 0.1 -0.2 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.1 0.5 0.3 -0.1
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