Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1186921 to 1189596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1189852 to 1191772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1191974 to 1192832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1192937 to 1193713 14265 mRNA_5898: 14266 - Hypothetical Protein, at 1194829 to 1196243 14266
Group Condition mRNA_5894 mRNA_5895 mRNA_5896 mRNA_5897 mRNA_5898
14262
14263
14264
14265
14266
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   -0.3 -0.1 -2.9
growth on oleic acid YNB Oleic Acid 0.1   -0.7 -0.0 -1.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   -0.6 -0.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   -0.6 0.5 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   -0.1 -0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.6 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.3 -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.5 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4   -0.1 -0.3 0.1
growth on ricinoleic acid YNB Glucose -0.2   -0.3 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -0.0 -0.2 -0.1
growth on oleic acid YNB Glucose -0.1   -0.5 -0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.3 0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1   0.2 0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.3 0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.3 0.1 0.1
growth on ypd YPD -0.2   -0.4 0.3 0.5
auxotrophy YNB Glucose 75mM Methionine 0.0   -0.1 -0.1 0.5
auxotrophy Dropout Complete -0.1   0.1 -0.4 1.2
auxotrophy YNB Glucose -0.5   0.2 0.0 1.3
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.3 0.5 0.9
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