Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1185881 to 1186514 14261 mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1186921 to 1189596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1189852 to 1191772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1191974 to 1192832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1192937 to 1193713 14265
Group Condition mRNA_5893 mRNA_5894 mRNA_5895 mRNA_5896 mRNA_5897
14261
14262
14263
14264
14265
growth on ricinoleic acid YNB Ricinoleic Acid   -0.3   -0.6 -0.8
ypd buoyancy 40 hrs Low Buoyancy   -0.1   -0.5 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.0   -0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2   -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2   -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.4   -0.1 -0.3
growth on oleic acid YNB Glucose   -0.1   -0.5 -0.0
growth on ricinoleic acid YNB Glucose   -0.2   -0.3 -0.1
growth on oleic acid YNB Oleic Acid   0.1   -0.7 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   -0.3   -0.0 -0.2
auxotrophy Dropout Complete   -0.1   0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate   0.0   -0.3 -0.1
growth on ypd YPD   -0.2   -0.4 0.3
auxotrophy YNB Glucose   -0.5   0.2 0.0
auxotrophy YNB Glucose 75mM Methionine   0.0   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1   -0.3 0.0
ypd buoyancy 40 hrs High Buoyancy   0.1   -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.1   -0.3 0.4
auxotrophy YNB Glucose 75mM Arginine   -0.1   -0.3 0.5
ypd buoyancy 40 hrs No Buoyancy Separation   0.3   -0.6 0.5
facs on lipid accumulation Sorted High BODIPY Gate   0.1   0.2 0.0
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