Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5891: 14259 - K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase, at 1182342 to 1185171 14259 mRNA_5892: 14260 - Hypothetical Protein, at 1185349 to 1185740 14260 mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1185881 to 1186514 14261 mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1186921 to 1189596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1189852 to 1191772 14263
Group Condition mRNA_5891 mRNA_5892 mRNA_5893 mRNA_5894 mRNA_5895
14259
14260
14261
14262
14263
buoyancy on lipid accumulation 40 hrs Low Buoyancy -4.9 -0.1   -0.4  
facs on lipid accumulation Sorted No BODIPY Gate -4.7 -0.4   -0.3  
auxotrophy YNB Glucose 75mM Arginine -5.0 -0.1   -0.1  
auxotrophy YNB Glucose -4.4 -0.0   -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -4.5 -0.0   -0.2  
growth on oleic acid YNB Glucose -4.4 0.0   -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -3.6 -0.6   0.0  
growth on ricinoleic acid YNB Glucose -3.6 0.2   -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -3.9 0.7   -0.3  
facs on lipid accumulation Sorted High BODIPY Gate -2.9 -0.5   0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -3.5 0.3   -0.0  
auxotrophy YNB Glucose 75mM Methionine -2.9 -0.0   0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.0 0.1   0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.8 -0.3   -0.2  
ypd buoyancy 40 hrs High Buoyancy -2.0 -0.1   0.1  
growth on oleic acid YNB Oleic Acid -2.4 0.3   0.1  
growth on ypd YPD -1.0 -0.4   -0.2  
ypd buoyancy 40 hrs Low Buoyancy -1.3 -0.2   -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.7 -0.1   -0.1  
auxotrophy Dropout Complete 0.5 -0.3   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 2.3 0.1   0.3  
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