Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5870: 14238 - Hypothetical Protein, at 1126742 to 1127263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1127844 to 1131373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1131493 to 1135652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1136080 to 1137305 14241 mRNA_5874: 14242 - K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, at 1138140 to 1139450 14242
Group Condition mRNA_5870 mRNA_5871 mRNA_5872 mRNA_5873 mRNA_5874
14238
14239
14240
14241
14242
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 0.2 -4.6 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.3 0.0 -3.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.4 -0.4 -1.2 0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.3 -1.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -2.4 -0.0 1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0 -2.0 0.5 1.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.0 -0.5 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.2 -0.3 -0.3 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.4 -0.5 0.1
growth on ypd YPD -0.1 0.3 -0.2 0.1 0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.1 -0.2 0.2 0.5
auxotrophy Dropout Complete 0.0 0.0 -0.2 0.1 0.3
growth on oleic acid YNB Glucose 0.2 -0.1 -0.2 0.2 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 0.4 -0.0 -0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 0.1 0.3 0.1 0.3
growth on ricinoleic acid YNB Glucose 0.0 0.1 -0.6 0.5 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.1 0.2 0.0 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.0 0.3 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.0 0.6 -0.2 0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 0.3 0.0 0.7
auxotrophy YNB Glucose -0.2 0.1 0.3 0.4 0.5
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