Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1124723 to 1126548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1126742 to 1127263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1127844 to 1131373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1131493 to 1135652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1136080 to 1137305 14241
Group Condition mRNA_5869 mRNA_5870 mRNA_5871 mRNA_5872 mRNA_5873
14237
14238
14239
14240
14241
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.2 0.2 -4.6
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 -0.1 -2.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 -0.4 -0.4 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation   0.6 0.3 0.0 -3.1
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4 -0.0 -2.0 0.5
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.0 0.3 -1.3
facs on lipid accumulation Sorted High BODIPY Gate   0.0 -0.2 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.1 0.0 -0.5
growth on oleic acid YNB Oleic Acid   -0.2 -0.1 -0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.1 0.4 -0.5
auxotrophy Dropout Complete   0.0 0.0 -0.2 0.1
growth on ricinoleic acid YNB Glucose   0.0 0.1 -0.6 0.5
growth on oleic acid YNB Glucose   0.2 -0.1 -0.2 0.2
growth on ypd YPD   -0.1 0.3 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine   -0.3 0.1 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.1 0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.0 0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.5 -0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.0 0.3 0.1
auxotrophy YNB Glucose   -0.2 0.1 0.3 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.8 0.4 -0.0 -0.2
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