Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1122384 to 1123037 14235 mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1123241 to 1124381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1124723 to 1126548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1126742 to 1127263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1127844 to 1131373 14239
Group Condition mRNA_5867 mRNA_5868 mRNA_5869 mRNA_5870 mRNA_5871
14235
14236
14237
14238
14239
growth on oleic acid YNB Oleic Acid   -0.3   -0.2 -0.1
growth on oleic acid YNB Glucose   -0.6   0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0   -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy   -0.3   0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.2   0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.1   -0.3 0.1
auxotrophy Dropout Complete   -0.2   0.0 0.0
auxotrophy YNB Glucose   -0.1   -0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.5   -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy   -0.0   0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine   0.1   -0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.4   -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.2   0.1 -0.0
growth on ricinoleic acid YNB Glucose   0.1   0.0 0.1
growth on ypd YPD   0.3   -0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate   0.7   0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0   0.6 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.9   0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   1.1   0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.9   0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   1.2   0.8 0.4
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