Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5862: 14230 - K14998 SURF1, SHY1 surfeit locus 1 family protein, at 1110574 to 1111803 14230 mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1112014 to 1113676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1113887 to 1116821 14232 mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1117097 to 1118879 14233 mRNA_5866: 14234 - KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily), at 1119164 to 1122161 14234
Group Condition mRNA_5862 mRNA_5863 mRNA_5864 mRNA_5865 mRNA_5866
14230
14231
14232
14233
14234
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -2.7 -0.1 0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -0.4 -0.1 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.3 -1.5 -0.0 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.5 -0.1 -0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.8 -0.1 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -1.0 -0.2 -0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.6 -0.5 -0.0 0.3 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.2 -0.3 -0.2 -0.2
auxotrophy YNB Glucose -0.4 0.8 -0.0 -0.1 -0.5
growth on oleic acid YNB Glucose 0.2 0.2 -0.3 0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 0.4 -0.2 -0.3 -0.3
growth on oleic acid YNB Oleic Acid 0.2 0.5 -0.1 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.7 1.2 0.1 -0.1 -0.5
auxotrophy Dropout Complete 0.1 0.9 -0.1 -0.2 -0.7
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.0 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.6 0.5 -0.0 -0.2 0.1
growth on ypd YPD -0.2 1.7 0.0 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 3.4 0.0 0.4 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 2.9 -0.0 0.1 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 3.5 -0.2 0.5 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.9 3.2 -0.0 0.4 0.7
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