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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5857: 14225 - K01875 SARS, serS seryl-tRNA synthetase, at 1099938 to 1101615
14225
mRNA_5858: 14226 - HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959, at 1102268 to 1103746
14226
mRNA_5859: 14227 - BLAST probable atp-binding cassette transporter [Ceraceosor..., at 1104171 to 1104734
14227
mRNA_5860: 14228 - K19770 RNASEK ribonuclease kappa, at 1104948 to 1105402
14228
mRNA_5861: 14229 - K16261 YAT yeast amino acid transporter, at 1105736 to 1108814
14229
Group
Condition
mRNA_5857
mRNA_5858
mRNA_5859
mRNA_5860
mRNA_5861
14225
14226
14227
14228
14229
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.7
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.3
0.0
growth on ricinoleic acid
YNB Glucose
0.2
-0.6
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.6
0.2
growth on oleic acid
YNB Glucose
-0.0
0.0
-0.2
auxotrophy
Dropout Complete
-0.0
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
0.1
auxotrophy
YNB Glucose
0.0
0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.0
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.5
0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.6
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
0.2
growth on ypd
YPD
0.0
0.4
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.6
0.1
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