Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5838: 14206 - Hypothetical Protein, at 1053748 to 1057363 14206 mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1057986 to 1059874 14207 mRNA_5840: 14208 - Hypothetical Protein, at 1060161 to 1062503 14208 mRNA_5841: 14209 - KOG1577 Aldo/keto reductase family proteins, at 1062734 to 1064125 14209 mRNA_5842: 14210 - K04508 TBL1 transducin (beta)-like 1, at 1064235 to 1067284 14210
Group Condition mRNA_5838 mRNA_5839 mRNA_5840 mRNA_5841 mRNA_5842
14206
14207
14208
14209
14210
auxotrophy Dropout Complete -0.7 -0.4 0.0 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.1 0.2 0.2 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.4 0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.2 -0.5 -0.0 0.2
growth on oleic acid YNB Oleic Acid -0.7 -0.0 0.1 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 0.1 -0.1 0.3 0.2
growth on oleic acid YNB Glucose -0.4 -0.1 0.2 0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.4 -0.1 0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 -0.3 0.3 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.0 0.3 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.0 -0.2 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.1 -0.1 -0.0 0.2
auxotrophy YNB Glucose -0.8 0.0 0.3 0.0 0.1
growth on ricinoleic acid YNB Glucose -0.9 0.3 0.2 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.4 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.1 -0.0 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 -0.1 0.1 0.0
growth on ypd YPD 0.1 0.0 0.0 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.1 -0.3 -0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.1 -0.3 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0 0.2 0.1 -0.2
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