Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5815: 14183 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 1006011 to 1008191 14183 mRNA_5816: 14184 - KOG1437 Fasciclin and related adhesion glycoproteins, at 1009642 to 1012931 14184 mRNA_5817: 14185 - K09680 coaW type II pantothenate kinase, at 1013105 to 1015263 14185 mRNA_5818: 14186 - K14857 SPB1, FTSJ3 AdoMet-dependent rRNA methyltransferase SPB1, at 1015900 to 1019364 14186 mRNA_5819: 14187 - K10761 THG1 tRNA(His) guanylyltransferase, at 1019559 to 1020828 14187
Group Condition mRNA_5815 mRNA_5816 mRNA_5817 mRNA_5818 mRNA_5819
14183
14184
14185
14186
14187
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.2      
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.1      
growth on oleic acid YNB Oleic Acid -0.7 0.0      
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.0      
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2      
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.1      
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.2      
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1      
growth on ricinoleic acid YNB Glucose 0.2 -0.1      
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1      
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0      
growth on ypd YPD -0.0 0.2      
growth on oleic acid YNB Glucose 0.4 -0.1      
auxotrophy YNB Glucose 0.3 0.1      
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1      
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.2      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.2      
auxotrophy Dropout Complete 0.5 0.1      
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.3      
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 0.2      
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