Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993823 to 996800 14180 mRNA_5813: 14181 - K15340 DCLRE1A, SNM1A, PSO2 DNA cross-link repair 1A protein, at 996990 to 1000538 14181 mRNA_5814: 14182 - K06669 SMC3, CSPG6 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6), at 1000707 to 1005630 14182 mRNA_5815: 14183 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 1006011 to 1008191 14183 mRNA_5816: 14184 - KOG1437 Fasciclin and related adhesion glycoproteins, at 1009642 to 1012931 14184
Group Condition mRNA_5812 mRNA_5813 mRNA_5814 mRNA_5815 mRNA_5816
14180
14181
14182
14183
14184
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1   -0.7 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.0   -0.8 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1   -0.7 0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4   0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1   0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2   -0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.0   -0.0 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.3   -0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2   -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1   0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0   0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.4   0.3 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.1   0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0   0.1 0.0
growth on ricinoleic acid YNB Glucose -0.2 0.2   0.2 -0.1
auxotrophy YNB Glucose -0.3 0.1   0.3 0.1
auxotrophy Dropout Complete -0.4 0.2   0.5 0.1
growth on ypd YPD -0.1 0.4   -0.0 0.2
growth on oleic acid YNB Glucose 0.0 0.1   0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1   0.5 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2   0.8 0.2
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